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Diffstat (limited to 'docs/alignment.rst')
| -rw-r--r-- | docs/alignment.rst | 49 |
1 files changed, 49 insertions, 0 deletions
diff --git a/docs/alignment.rst b/docs/alignment.rst new file mode 100644 index 0000000..cadcceb --- /dev/null +++ b/docs/alignment.rst @@ -0,0 +1,49 @@ +.. highlight:: rest + +.. _alignment_module: + +The :mod:`modelcif.alignment` Python module +=========================================== + +.. automodule:: modelcif.alignment + +.. autoclass:: Identity + :members: + +.. autoclass:: ShorterSequenceIdentity + +.. autoclass:: AlignedPositionsIdentity + +.. autoclass:: AlignedResiduePairsIdentity + +.. autoclass:: MeanSequenceIdentity + +.. autoclass:: Pair + :members: + +.. autoclass:: AlignmentMode + :members: + +.. autoclass:: Global + :members: + +.. autoclass:: Local + :members: + +.. autoclass:: AlignmentType + :members: + +.. autoclass:: Pairwise + :members: + +.. autoclass:: Multiple + :members: + +.. autoclass:: Score + :members: + +.. autoclass:: BLASTEValue + :members: + +.. autoclass:: HHblitsEValue + :members: |