#alignment

  1. aligned-vec

    Aligned vector and box containers

    v0.6.4 3.9M #vec #alignment #allocation #box #slice
  2. aligned

    A newtype with alignment of at least A bytes

    v0.4.3 1.3M #alignment #static #array
  3. include_bytes_aligned

    macro that embeds the bytes of an external file into the executable and guarantees that they are aligned

    v0.2.0 64K #alignment #include-bytes #byte #macro
  4. rasusa

    Randomly subsample reads or alignments

    v2.2.2 750 #bioinformatics #fastq #coverage #subsampling #alignment
  5. tabular

    Plain text tables, aligned automatically

    v0.2.0 114K #text-formatting #text-alignment #table-formatting #alignment #cli-table
  6. alignoth

    creating alignment plots from bam files

    v1.4.6 #plot #vega-lite #html #alignment #stdout #bam-file #wizard #visualized
  7. nanocount

    A dual-guide protospacer counter for long-read nanopore data

    v0.1.1 #long-read #nanopore #grep #crispr #alignment #bio
  8. wordvec

    A compact SmallVec<T>-like container with only align_of::<T>() overhead for small stack-only instances

    v0.2.0 #small-vec #instance #alignment #usize #component #stack-only #memory-layout #memory-footprint #ecs #nlp
  9. padder

    A highly efficient Rust crate for padding data during runtime

    v2.1.0 #padding #run-time #data-formatting #string-formatting #alignment #in-place #truncating #emoji #data-structures #data-string
  10. rezip

    Merges ZIP/NPZ archives recompressed or aligned and stacks NPY arrays

    v0.2.2 550 #npy #alignment #npz #merge
  11. segul

    An ultrafast and memory-efficient tool for phylogenomics

    v0.23.2 #genomics #phylogenomics #alignment
  12. tabwriter

    Elastic tabstops

    v1.4.1 741K #white-space #alignment #elastic #tabs #table
  13. phyloEvolve

    variant analyzer for human genomics

    v0.4.0 #phyloevolve #genomics #alignment #genomics-variant #plotter #command #embedded #genome-analysis
  14. aligned-array

    A newtype with alignment of at least A bytes

    v1.0.1 133K #alignment #static #array
  15. egui_alignments

    alignment tools for egui

    v0.3.7 #alignment #egui #layout
  16. elain

    Set a type's minimum alignment with const generics

    v0.3.1 35K #const-generics #alignment #layout
  17. unsafe-tools-mimic

    Size and alignment matched opaque types

    v0.1.2 17K #alignment #unsafe #mimic #size #opaque
  18. text-to-ascii-art

    program to convert text to ASCII art

    v0.1.10 360 #ascii-art #ascii-art-text #convert-text #alignment #text-art #font #text-alignment
  19. sweepga

    Efficient pangenome alignment filtering and sparsification tool

    v0.1.1 #genomics #bioinformatics #pangenome #alignment #filtering
  20. ansi-align

    Text alignment library with ANSI escape sequence and Unicode support

    v0.2.2 #text #text-alignment #unicode #alignment #formatting #unicode-formatting
  21. aligned-cmov

    Fast constant-time conditional moves of aligned bytes

    v2.3.0 #constant-time-cryptography #constant-time #alignment #cryptography #utilities
  22. pack1

    Byte array newtypes for different primitive types

    v1.0.0 53K #byte-array #newtype #primitive #different #alignment #repr
  23. offline

    Ways to make things more or less aligned

    v1.1.0 #alignment #ways #less
  24. mm2

    minimap2 frontend

    v0.25.6 4.2K #query #minimap2 #alignment #front-end #target #samtools #fa
  25. static-reflect

    Static type information, giving a form of compile-time reflection

    v0.2.0-alpha.9 800 #compile-time-reflection #jit-compiler #forms #alignment #run-time
  26. kondrak-aline

    Kondrak's ALINE alignment algorithm

    v0.1.5 250 #kondrak #aline #algorithm #alignment #phonetic #salience #sequence-alignment #default-value
  27. dio-align

    Query direct I/O alignment requirements for a filesystem path

    v0.1.0 #alignment #dio #block-alignment #direct-io
  28. align_ext

    An extension trait for Rust integer types to make integers aligned to a power of two

    v0.1.0 2.6K #alignment #integer #extension-traits
  29. ps-buffer

    aligned heap buffer

    v0.1.0-21 #heap-buffer #alignment
  30. image-texel

    A texel type and allocated buffers suitable for image data

    v0.5.0 500 #image-buffer #texel #pixel #layout #alignment #type-system #plain-old-data #rgb #bytemuck #data-layout
  31. swamp-vm-types

    Low-level types for memory layout, addresses, and instructions used by the Swamp Virtual Machine (VM)

    v0.2.26 #vm-memory #memory-addresses #swamp #low-level #alignment #data-structures
  32. qsv-tabwriter

    Elastic tabstops

    v2.0.0 2.5K #fixed-width #alignment #elastic #tabs #table
  33. gofmt

    implemention

    v0.1.0 #formatter #golang #ast #parser #alignment #implemention
  34. asts

    v0.16.4 #bam #alignment #subreads #bam-file
  35. colonnade

    format tabular data for display

    v1.3.3 #wrap-text #justify #alignment
  36. aligned_box

    Allocate heap memory with user-specified alignment

    v0.3.0 1.5K #heap-memory #memory-alignment #alignment #box
  37. bammap2

    A lightweight wrapper to run minimap2 (v2.30) alignments directly on BAM file

    v0.1.4 #long-read #minimap2 #alignment #bam
  38. cursive-aligned-view

    A view wrapper for gyscos/cursive views which aligns child views

    v0.7.0 360 #tui #view #alignment #cursive
  39. align3d

    Alignment with Iterative Closest Point (ICP) for point clouds and images

    v1.0.3 #point-cloud #rgbd #icp #alignment #3d #3d-point-cloud
  40. skani

    fast tool for calculating ANI between metagenomic sequences, such as metagenome-assembled genomes (MAGs). It is extremely fast and is robust against incompleteness and fragmentation, giving accurate ANI estimates.

    v0.1.1 #genome #mag #ani #fraction #alignment #metagenomic #contigs #dna #fragmentation
  41. aligners

    alignment guarantees for data

    v0.0.10 120 #simd #simd-alignment #byte #alignment
  42. align-address

    Functions for aligning addresses

    v0.3.0 5.9K #alignment #address #align
  43. xlang_abi

    ABI safe interfaces used by xlang

    v0.2.0 #abi-safe #xlang #stable-abi #alignment #interface #deallocate #hash #accross
  44. pane

    Align text inside of resizable rectangular panes

    v0.4.0 #font #alignment #word #render #render-font
  45. tabwriter-bin

    Command line tool for elastic tabstops

    v0.2.2 140 #white-space #alignment #table #elastic #tabs
  46. gchemol-geometry

    gchemol: a Graph-based CHEMical Objects Library

    v0.1.1 #gchemol #superpose #superposition #object #alignment #graph-based #candidate #molecule #geom
  47. cargo-align

    aligning code

    v0.1.2 100 #terminal #alignment #cargo #format #cargo-tool
  48. mudskipper

    Convert genomic alignments to transcriptomic BAM/RAD files

    v0.1.0 #genomics #rna-seq #bam #rad #alignment #transcript
  49. tabulate-rs

    Pretty-print tabular data. Port of python-tabulate to Rust.

    v0.1.0 #pretty-print #tabular-data #table-format #python-tabulate #alignment #textual #mirror #builder-style
  50. disfmt

    Rust code disformatter

    v0.1.1 #symbols #alignment #process #readability #aligning #vertically #ensuring
  51. secondary_rewriter

    Adds SEQ and QUAL fields to secondary alignments from the primary alignment

    v0.2.0 #alignment #secondary #bam #qual #seq #variant-calling #cram #sam #samtools
  52. aligned-utils

    Common utilities to work with aligned values and allocation

    v1.0.2 100 #alignment #no-std-alloc #no-std
  53. subranges

    manage non-interssecting integer intervals

    v0.3.3 #interval #integer #collection #free #alignment
  54. bytecord

    A byte reading-building utility library

    v0.0.2 #reading-building #alignment #binary-data #byte #networking #memory-map #bounds-checking #zero-copy
  55. boost_align

    Boost C++ library boost_align packaged using Zanbil

    v0.1.0 #boost #alignment #zanbil #packaged
  56. align-data

    Simply increase the alignment of any statics or include_bytes!

    v0.1.0 2.3K #include-bytes #alignment #static
  57. Try searching with DuckDuckGo.

  58. maf2bed

    Converts multiple alignment format (MAF) files to a BED format for tabixing. Used with jbrowse-plugin-mafviewer

    v0.3.0 #format #bed #maf #convert #alignment
  59. const-generic-alignment

    Const-generic-aligned ZST

    v0.3.0 550 #const-generics #alignment #zst #zero-sized
  60. rspoa

    A POA implementation in Rust

    v0.1.0 #poa #fasta #graph-path #alignment #score #gap #gaf #gfa
  61. text_align

    that provides a single trait for various alignments of text

    v0.3.1 #alignment #alignments-of-text #right-align #justify #friends
  62. miniprot-sys

    Bindings to libminiprot

    v0.1.0 #bioinformatics #fasta-protein #fasta #protein #alignment
  63. alinio

    assist in alignment and table generation in TUI applications

    v0.2.1 #alignment #unicode #table #terminal
  64. text_alignment

    Align your text in Rust in the CLI

    v0.1.0 #cli #alignment #center #text #padding
  65. aligned-task-scheduler

    A scheduler that runs tasks at exact minute intervals with an optional offset, ensuring tasks are aligned to precise time boundaries

    v0.1.0 #task-scheduling #alignment #time #interval #boundaries #ensuring #async-runtime #minute
  66. tsverify

    Compare alignments produced by tsalign

    v0.2.0 260 #compare #alignment #producing #tsalign
  67. alignment-exporter

    Proc macro providing alignment info for a user-defined struct

    v0.1.3 #alignment #struct #packing #padding #layout #graphics
  68. num-align

    Some hal for os

    v0.1.0 330 #alignment #num #align
  69. packed

    A safe #[repr(packed)] interface

    v0.4.2 #alignment #unaligned #data #nue
  70. zero-copy-pads

    Padding/aligning values without heap allocation

    v0.2.0 230 #zero-copy #column #padding #alignment #string
  71. raylib-ext

    Adds some small features to raylib-rs

    v0.1.0 #raylib-rs #text #centered #alignment #background-color
  72. memalloc

    Memory allocation in stable rust

    v0.1.0 68K #memory-management #stable-api #allocation #alignment #process
  73. shafu-rs

    Solidity formatter in style of @shafu0x

    v0.1.0 #formatter #alignment #solidity #uint256 #assignment #multi-line #unsigned-integer #braces #struct-fields #declaration
  74. addr_align

    aligning values (usually some kind of address) to a specified boundary

    v0.1.0 #alignment #address
  75. aa2nucaln

    Convert an amino acid alignment into a nucleotide alignment

    v0.1.1 #genomics #bio #alignment #dna #nucelotide
  76. walign

    Word alignment toolkit

    v0.1.6 #word #toolkit #alignment
  77. coercion

    In-place coercions between types of the same size and alignment

    v0.1.0 #in-place #size #type-conversion #alignment #coerce
  78. libwfa2

    Bindings to the C implementation of WFA2-lib

    v0.1.1 #wfa #bioinformatics #alignment
  79. cramino

    quickly extract quality metrics from bam or cram files

    v0.9.0 #bam #cram #pacbio #ont #alignment #bioinformatics
  80. rotate

    Small program to align a distance vector defined through two atoms to a cartesian axis

    v0.4.0 #cartesian #alignment #axis #vector #distance
  81. textflow

    An extension for textwrap

    v0.2.0 #terminal #console #alignment #format #grid
  82. maligned

    A memory alignment library

    v0.2.1 5.6K #alignment #array #align
  83. math_dsl_macro

    Proc-macro that converts LaTeX-code to rust-code

    v0.1.0 #proc-macro #convert #latex #rust-code #alignment #macro-use #psi #frac #zu