intspan

• intspan
  • Install
  • Concepts
    • IntSpans
    • Runlists - IntSpans on chromosomes stored in JSON
    • Ranges
    • Links of ranges
  • Synopsis
    • spanr help
    • rgr help
    • linkr help
  • Examples
    • spanr
    • rgr
    • linkr
      • S288c
      • Atha
  • License

Install

Current release: 0.8.7

cargo install intspan

cargo install --path . --force #--offline

# or
brew install intspan

# test
cargo test -- --test-threads=1

# local docs
cargo doc --open

# build under WSL 2
mkdir -p /tmp/cargo
export CARGO_TARGET_DIR=/tmp/cargo
cargo build

Concepts

IntSpans

An IntSpan represents sets of integers as a number of inclusive ranges, for example 1-10,19,45-48.

The following figure shows the schema of an IntSpan object. Jump lines are above the baseline; loop lines are below it.